PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_D12G1579
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 196aa    MW: 22556.5 Da    PI: 6.5114
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_D12G1579genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.51.6e-1481130554
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                  +++rr+++NRe+ArrsR RK++ ++eL   v  L +eN++L+++l++ ++
  Gh_D12G1579  81 RKQRRMISNRESARRSRMRKQKHLDELLSQVVRLRNENQSLIDKLKHVSD 130
                  79****************************************99998765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.7E-1577141IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.86479142IPR004827Basic-leucine zipper domain
PfamPF001704.3E-1281130IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.0E-1281153No hitNo description
SuperFamilySSF579591.61E-1281130No hitNo description
CDDcd147021.23E-1882133No hitNo description
PROSITE patternPS0003608499IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    Send to blast
MVPSELSTGL HYLAPENPIL IPDNLGMMQN TIPGFHFDRF LNIQSNSHIP LPAHEFIAQS  60
LCTSTSDEAE EHQLSRIIDE RKQRRMISNR ESARRSRMRK QKHLDELLSQ VVRLRNENQS  120
LIDKLKHVSD CHDQVVQENA RLKEEASDLR RMVTDLRTGS PYSLALRELE DVPCNTAYLR  180
AEPTNQSIAN SVDLLY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
193100RRSRMRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012438457.11e-142PREDICTED: basic leucine zipper 43-like
TrEMBLA0A0D2PWI41e-142A0A0D2PWI4_G
STRINGVIT_01s0010g00930.t011e-85(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM31122667
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13600.11e-40basic leucine-zipper 58